Institute of Molecular Genetics of the Czech Academy of Sciences
The Prague 10x Genomics Experience Meeting, co-hosted with GeneTICA s. r. o. and Institute of Molecular Genetics of the Czech Academy of Sciences (IMG), is a one-day event intended for those new to single cell and spatial technology as well as seasoned 10x Genomics technology users.
This highly informative series of exclusive scientific sessions will feature keynote presentations by leading researchers, expert panels, and networking opportunities with peers. Lunch, coffee, and beverages will be included. Don’t miss it!
| 10:00 | Registration |
| Session 1 | Single-cell and sequencing based spatially resolved transcriptomics |
|---|---|
| 10:30 – 10:40 | Welcome Jakub Kropáček GeneTiCA group / Michal Kolář, Laboratory of Genomics and Bioinformatics, IMG |
| 10:40 – 10:55 | Single cell platform update Luciana Menescal, 10x Genomics |
| 10:55 – 11:10 | Lineage plasticity in childhood leukemia: a single-cell and computational approach Jan Stuchly, Ph.D., CLIP, 2nd Medical School, Charles University Prague |
| 11:10 – 11:25 | Cell type and regulatory analysis in amphioxus illuminates evolutionary origin of the vertebrate head Irina Kozmikova, Laboratory of Transcriptional Regulation, IMG |
| 11:25 – 11:40 | A single-cell atlas of human upper respiratory lymphocytes Anna Kratochvílová, Laboratory of Adaptive Immunity, IMG |
| 11:40 – 11:55 | Visium platform update Luciana Menescal, 10x Genomics |
| 11:55 – 12:25 | Mouse embryo data set on Visium HD Antje Becker, 10x Genomics |
| 12:30 – 13:30 | Lunch |
| Session 2 | Imaging based spatially resolved transcriptomics |
|---|---|
| 13:30 – 13:50 | Xenium in Situ platform update and customer study Andres Ramires, 10x Genomics |
| 13:50 – 14:05 | The role of NK cells in immunologically cold and hot carcinomas Barbora Tunková, SOTIO Biotech a.s. |
| 14:05 – 14:20 | Unlocking spatial biology in ischemic brain with Xenium’s 5K panel Daniel Žucha, Laboratory of Gene Expression, Institute of Biotechnology of the Czech Academy of Sciences |
| 14:20 – 14:40 | Live Xenium data processing demonstration (how the analysis looks like in real) Andres Ramires, 10x Genomics |
| 14:40 – 14:55 | Best practice for Xenium In Situ sample preparation Daniel Nesrsta, GeneTiCA group |
| 14:55 – 15:10 | Quiz |
| 15:10 – 15:15 | Farewell |
| Session 3 | Have coffee with your expert (time to discuss your projects) |
|---|---|
| 15:45 – 16:30 | Xenium, Andres Ramirez, 10x Genomics Chromium, Luciana Menescal, 10x Genomics Visium, Antje Becker, 10x Genomics Tour de Laboratory of Genomics and Bioinformatics, Michal Kolář, IMG (10 participants only, register yourself during the lunch) |
The workshop is supported in part by The project National Institute for Cancer Research (Programme
EXCELES, ID Project No. LX22NPO5102)—Funded by the European Union—Next Generation EU.