scanR User Meeting + Advanced Training

  • Date & Time: 21. 9. 2026 - 23. 9. 2026
  • Location: IMG, Vídeňská 1083, building F

This three-day event combines a user meeting with intensive practical training focused on advanced image analysis in the scanR platform. The first day is dedicated to scientific exchange among scanR users, including presentations of research projects, user experiences and discussions with application specialists. The following two days provide advanced hands-on training focused on AI-assisted analysis and custom AI model development.


The practical sessions are supported by EVIDENT application specialists and emphasize direct work with software and real datasets.

Topics covered include:

  • Integration of AI models into scanR analysis
  • User Meeting & Scientific Exchange
  • AI-Assisted Analysis in scanR
  • TruAI workflow and model philosophy
  • AI-based segmentation
  • Processing of user datasets
  • Training Custom AI Models
  • Annotation strategy and model validation
  • cellSens AI model training

Course Structure and Practical Training

Short lectures introduce the theoretical background of AI-based image analysis and machine learning workflows.

Most of the time is dedicated to practical sessions in small groups, allowing participants to work directly with scanR software and their own datasets under the guidance of experienced application specialists.

During the hands-on sessions, participants will:

  • Learn the complete scanR analysis workflow
  • Understand AI-assisted segmentation strategies
  • Process and analyze their own image datasets
  • Train custom AI models
  • Validate trained models and optimize performance
  • Integrate AI models into routine scanR analysis

The goal of the course is not only to demonstrate available tools, but to help participants understand when and how AI-based approaches can be applied effectively in biological image analysis.

More information – https://course.img.cas.cz/scanr/.