3rd 10X Genomics Experience Meeting

  • Termín: 14. 5. 2024  |  8:30 - 16:30
  • Místo: IMG, Milan Hašek Auditorium

…for those new to single cell transcriptomics and spatial transcriptomics technology as well as experienced 10x Genomics technology users.

This highly informative series of exclusive scientific sessions will feature keynote presentations by leading researchers, expert panels, and networking opportunities with peers.

The workshop is supported in part by The project National Institute for Cancer Research (Programme EXCELES, ID Project No. LX22NPO5102)—Funded by the European Union—Next Generation EU.


08:30 – 09:30Registration

Session 1

09:30 – 11:0010X Genomics News
Agnieszka Ciesielska, 10X Genomics

Exploring the role of hematopoietic stem cells during infection
Meritxell Alberich Jorda, Laboratory of Haematooncology, Institute of Molecular Genetics of the Czech Academy of Sciences (IMG)

Deciphering fibroblast heterogeneity in developing mammary gland using scRNA

Zuzana Sumbalová Koledová, Laboratory of Tissue Morphogenesis and Cancer, IMG

Role of ISL1 transcription factor in the development of pancreatic endocrine lineages
Valeria Fabriciová, Laboratory of Molecular Pathogenetics, Institute of Biotechnology of the Czech Academy of Sciences (IBT)
11:00 – 11:301st coffee break

Session 2

11:30 – 12:50Subpopulations of NG2-expressing cells in healthy and ischemic brain
Lucie Janecková, Laboratory of Cell and Developmental Biology, IMG

Probing the transcriptome at single-sell and spatial levels
Lukas Valihrach, Laboratory of Gene Expression, IBT

Scdrake: a reproducible and scalable pipeline for scRNA-seq data analysis
Jan Kubovciak, Laboratory of Genomics and Bioinformatics, IMG

Genetica Technical Support Insight
Michaela Tlustá, GeneTiCA s.r.o.
12:30 – 13:30Lunch & Quiz submission

Session 3

13:30 – 14:50Identification of drug-resistant mantle cell lymphoma subclones at diagnosis using single-cell transcriptomics
Dmitrij Kazancev, Institute of Pathological Physiology, 1st Faculty of Medicine,
Charles University

Endothelial pyrimidine synthesis deficiency promotes tumor growth
Hyroššová Petra, Laboratory of Cellular Metabolism, IBT

Change of tumor clonal composition during disease course
Boris Tichý, Core Facility Genomics, CEITEC

Xenium talk
Agnieszka Ciesielska, 10X Genomics
15:2010X Genomics Grant program & Quiz winners
15:30End of lectures
15:10 – 16:30Have a coffee with your expert

Online registrationhttps://10xgen.com/1CH
Contact person – Michal Kolář, michal.kolar@img.cas.cz